The concert sound III system has 2 6x9's on the rear deck run as subwoofers, meaning they only get ~150hz and down in the sound field.
The Rear door speakers are 5 1/4" round and get ~150-15000hz.
The front door speakers are 5 1/4" round and get ~150-7500hz.
The front door tweeters are 1.5" round and get ~6000-20000hz.
The center channel speaker is a 3.5" round and gets ~2000-20000hz.
All the different speakers are active crossover type, meaning the amplifier runs the crossovers digitally inside with sound processing. The amplifier takes a standard 4 channel input(Front/Rear Left/Right) and uses it' built in digital sound processor, then outputs it on the 9 channels it has.
You have 3 options when replacing the deck.
1. Integrate with the factory amplifier. It is a 20WRMSx9 unit, meaning it has more power than any deck you will put in, and 9 channels output. Crutchfield and others sell integration harnesses so all you have to do is plug in at the front and it handles all the integration required.
2. Run your new aftermarket deck with an amplifier bypass. You will be required to fabricate passive impedance matching and crossover networks so you can run all the speakers. The impedance or ohms, is the load the amplifier sees. Aftermarket decks can run on a 4ohm load, but will shut down if you drop to 2 ohms. The power is halved if you go up to 8 ohms. It is way more complicated than this, but this is the easy way to explain it.
Basically you would run the front door 2 speakers through a passive crossover device. The center channel would have to be tied in to one door or the other, also through the device.
The rear doors and rear deck speakers would have to be tied together, also through a passive device.
Like this:
Amazon.com: PCZXO - 2-Way Passive Car Audio 12dB/octave Crossovers Compatible with All Car Audio Component Systems. Made by Alphasonik, Sold in Pairs.: Cell Phones & Accessories
You would need 1 per set of speakers tied together.
Since you asked about replacing speakers, a new component front set comes with the passive device in the box.
The rears could be run full range, with no crossover network, but you would need to wire them all in series, dropping the impedance to 8 ohms and lowering output from the deck.
If you choose this version, do component fronts, coaxial rears, and delete the center channel.
3. Run new aftermarket amplifiers with digital crossovers. Many companies sell smaller 25x4 amplifiers. You can usually pick them up new for $200 from solid manufacturers, or used at pawn shops for $50. Run 2 of them and you can then amp each independent speaker and dial in it's digital crossover.
This is obviously the most labor and most in parts.
Personally option 1 is more than enough unless you have blown speakers. Now the factory speakers are just paper garbage, but if they work, I wouldn't mess with them until you need to.
If a significant number are blown I would do option 2.
If you are going to add real subwoofers down the line option 3.